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mouse anti-e2f4 monoclonal antibody clone llf4-2  (Millipore)


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    Structured Review

    Millipore mouse anti-e2f4 monoclonal antibody clone llf4-2
    Mouse Anti E2f4 Monoclonal Antibody Clone Llf4 2, supplied by Millipore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/monoclonal+anti-e2f4/antibodies+directed+against+e2f4/us11047867-254-13-16
    Average 90 stars, based on 1 article reviews
    mouse anti-e2f4 monoclonal antibody clone llf4-2 - by Bioz Stars, 2026-09
    90/100 stars

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    Recombinant:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Protease Inhibitor:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Western Blot:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Imaging:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Purification:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    RNA HS Assay:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Reverse Transcription:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    SYBR Green Assay:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Staining:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Plasmid Preparation:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Software:

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation
    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.



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    Regulation of HBV transcription was involved in E2F4. (A) Genes including P16, P21, p53, NFԟB-p65, NFԟB-p50, VPS4b, HNF1ɑ, HNF4ɑ, HNF6ɑ, SNAI1, ZEB2, PPARɑ, RXRɑ, CREB2, SOX7, and TR2, which have been reported to play important roles in transcription or replication of HBV, were screened. qPCR analysis of gene expression of various transcription factors related to HBV replication in HepG2.2.15 after being infected with Id1Ad. n = 3. (B) The qPCR analysis was subjected to screen gene expression of various HLH transcription factors possibly related to Id1 in HepG2 transfected with HBV1.1 plasmid. GAPDH expression was used as internal control. * P < 0.05 and ** P < 0.01. n = 5. (C) Effects of a series of HLH transcription factors (including E2F4, CLOCK, TCF3, E40, USF1, HIF1ɑ ) overexpression on HBV Cp promoters were screened. Luciferase reporter vectors pGL3-Cp were cotransfected with overexpression plasmid into HepG2 cells. The cells were lysed and luciferase activity was determined at 48h after transfection. Meanwhile, the plasmid pRL-TK was used for normalizing the transfection efficiency. ** P <0.01. n = 5. (D) The comparison of E2F4 protein level among HepG2, HepG2-HBV1.1, HepG2.2.15 and HepAD38 (without tetracycline). (E) The E2F4 protein level in HepAD38 cells with tetracycline-inhibiting HBV transcription was detected by western blotting with GAPDH used as the control gene. (F) The qPCR analysis was subjected to screen gene expression of various E2F transcription factor in HepAD38 cells with tetracycline-inhibiting HBV transcription. ** P < 0.01. n = 5.

    Journal: International Journal of Biological Sciences

    Article Title: Cellular Id1 inhibits hepatitis B virus transcription by interacting with the novel covalently closed circular DNA-binding protein E2F4

    doi: 10.7150/ijbs.62106

    Figure Lengend Snippet: Regulation of HBV transcription was involved in E2F4. (A) Genes including P16, P21, p53, NFԟB-p65, NFԟB-p50, VPS4b, HNF1ɑ, HNF4ɑ, HNF6ɑ, SNAI1, ZEB2, PPARɑ, RXRɑ, CREB2, SOX7, and TR2, which have been reported to play important roles in transcription or replication of HBV, were screened. qPCR analysis of gene expression of various transcription factors related to HBV replication in HepG2.2.15 after being infected with Id1Ad. n = 3. (B) The qPCR analysis was subjected to screen gene expression of various HLH transcription factors possibly related to Id1 in HepG2 transfected with HBV1.1 plasmid. GAPDH expression was used as internal control. * P < 0.05 and ** P < 0.01. n = 5. (C) Effects of a series of HLH transcription factors (including E2F4, CLOCK, TCF3, E40, USF1, HIF1ɑ ) overexpression on HBV Cp promoters were screened. Luciferase reporter vectors pGL3-Cp were cotransfected with overexpression plasmid into HepG2 cells. The cells were lysed and luciferase activity was determined at 48h after transfection. Meanwhile, the plasmid pRL-TK was used for normalizing the transfection efficiency. ** P <0.01. n = 5. (D) The comparison of E2F4 protein level among HepG2, HepG2-HBV1.1, HepG2.2.15 and HepAD38 (without tetracycline). (E) The E2F4 protein level in HepAD38 cells with tetracycline-inhibiting HBV transcription was detected by western blotting with GAPDH used as the control gene. (F) The qPCR analysis was subjected to screen gene expression of various E2F transcription factor in HepAD38 cells with tetracycline-inhibiting HBV transcription. ** P < 0.01. n = 5.

    Article Snippet: Cells were blocked by goat serum and then incubated with Id1 and E2F4 antibodies at room temperature for 1 h. Mouse anti-Id1 monoclonal antibody (sc-133104) and mouse anti-E2F4 monoclonal antibody (sc-511) was obtained from Santa Cruz Biotechnology (USA).

    Techniques: Gene Expression, Infection, Transfection, Plasmid Preparation, Expressing, Control, Over Expression, Luciferase, Activity Assay, Comparison, Western Blot

    Regulation of HBV transcription in vivo and in vitro was positively mediated by E2F4. (A) HepG2.2.15 cells were transfected with an empty vector (pcDNA3.1) or increasing amounts of pcDNA3.1-E2F4-3×Flag expressing plasmids. After 3 days, expression of the Flag-tagged E2F4 and HBc proteins were analyzed by Western blotting. HBV DNA and pgRNA levels in cytoplasmic fractions were measured by qPCR, and expression of HBeAg and HBsAg in the supernatant of cell culture media were detected using ELISA. * P < 0.05 and ** P < 0.01. n = 5. (B) HepG2.2.15 cells were infected with RFPAd or siE2F4Ad. After 3 days, E2F4 and HBc proteins, HBV DNA and pgRNA, and HBeAg were detected. * P < 0.05 and ** P < 0.01. n = 5. (C) Effect of E2F4 on activity of HBV pGL3-Cp/Xp/SpI /SpII promoters were measured via dual luciferase reporter assay. * P < 0.05. n = 5. (D) The mice were randomly allotted to two groups of five individuals per group. Moderate siE2F4Ad or RFPAd were dissolved in 0.3 mL 0.9% normal saline and injected through the tail vein. The mice were sacrificed 20 days after injection and the liver tissue. Intracellular HBV DNA extracted from 10 mg liver tissue was analysed by Southern blotting (top panel). The expression of E2F4 and HBc in liver tissue lysates was tested by western blotting. β-actin protein level was used as an internal control. (E) The relative levels of HBeAg in serum samples were subjected by ELISA kits; ** P < 0.01. n = 5.

    Journal: International Journal of Biological Sciences

    Article Title: Cellular Id1 inhibits hepatitis B virus transcription by interacting with the novel covalently closed circular DNA-binding protein E2F4

    doi: 10.7150/ijbs.62106

    Figure Lengend Snippet: Regulation of HBV transcription in vivo and in vitro was positively mediated by E2F4. (A) HepG2.2.15 cells were transfected with an empty vector (pcDNA3.1) or increasing amounts of pcDNA3.1-E2F4-3×Flag expressing plasmids. After 3 days, expression of the Flag-tagged E2F4 and HBc proteins were analyzed by Western blotting. HBV DNA and pgRNA levels in cytoplasmic fractions were measured by qPCR, and expression of HBeAg and HBsAg in the supernatant of cell culture media were detected using ELISA. * P < 0.05 and ** P < 0.01. n = 5. (B) HepG2.2.15 cells were infected with RFPAd or siE2F4Ad. After 3 days, E2F4 and HBc proteins, HBV DNA and pgRNA, and HBeAg were detected. * P < 0.05 and ** P < 0.01. n = 5. (C) Effect of E2F4 on activity of HBV pGL3-Cp/Xp/SpI /SpII promoters were measured via dual luciferase reporter assay. * P < 0.05. n = 5. (D) The mice were randomly allotted to two groups of five individuals per group. Moderate siE2F4Ad or RFPAd were dissolved in 0.3 mL 0.9% normal saline and injected through the tail vein. The mice were sacrificed 20 days after injection and the liver tissue. Intracellular HBV DNA extracted from 10 mg liver tissue was analysed by Southern blotting (top panel). The expression of E2F4 and HBc in liver tissue lysates was tested by western blotting. β-actin protein level was used as an internal control. (E) The relative levels of HBeAg in serum samples were subjected by ELISA kits; ** P < 0.01. n = 5.

    Article Snippet: Cells were blocked by goat serum and then incubated with Id1 and E2F4 antibodies at room temperature for 1 h. Mouse anti-Id1 monoclonal antibody (sc-133104) and mouse anti-E2F4 monoclonal antibody (sc-511) was obtained from Santa Cruz Biotechnology (USA).

    Techniques: In Vivo, In Vitro, Transfection, Plasmid Preparation, Expressing, Western Blot, Cell Culture, Enzyme-linked Immunosorbent Assay, Infection, Activity Assay, Luciferase, Reporter Assay, Saline, Injection, Southern Blot, Control

    Transcription factor E2F4 was involved in Id1-mediated inhibition of HBV replication. (A) The location of Id1 (red) and E2F4 (green) in HepG2.215 cells under a natural state were detected by immunofluorescence images. DAPI (blue) were used to stain cell nucleus. Scale bar, 10 μm. (B) Lysates extracted from HepG2 cells expressing GFP-tagged E2F4 and Cherry-tagged Id1 were immunoprecipitated with anti-GFP or anti-Cherry, and the immunocomplexes were determined by immunoblot with respective anti-Cherry or anti-GFP antibody. (C) The western blot analysis following GST pull-down assay were performed with anti-Id1, anti-His, anti-E2F4, and anti-GST. The data showed that even though E2F4 expression in E. coli was unstable and easily degradable, Id1 also could be captured by E2F4. (D) Cytoplasmic-enriched(C) and nuclear-enriched(N) components from HepG2 cells (transfected with pCDNA3.1, pCDNA3.1+HBV1.1 and pcDNA3.1-Id1-Flag+HBV1.1, respectively) treated with a nuclear protein extraction kit were analyzed by immunoblot. Expression of GAPDH and PCNA, as markers for cytoplasm and nucleus respectively, was assessed by their specific monoclonal antibodies. The specificity of RB, p130, E2F4 and HBc bands were confirmed by their the specific antigenic peptides except Id1 by flag-antibody. (E) Southern blotting of HBV DNA was subjected to HepG2.2.15 cells after transfection early with shRNA-1/2 targeting Id1 and then infection with E2F4Ad. Southern blotting of HBV DNA was subjected to HepG2.2.15 cells after transfection early with shE2F4-1/2 targeting E2F4 and then infection with Id1Ad. The scramble control shRNA (shCont) was used as control group.

    Journal: International Journal of Biological Sciences

    Article Title: Cellular Id1 inhibits hepatitis B virus transcription by interacting with the novel covalently closed circular DNA-binding protein E2F4

    doi: 10.7150/ijbs.62106

    Figure Lengend Snippet: Transcription factor E2F4 was involved in Id1-mediated inhibition of HBV replication. (A) The location of Id1 (red) and E2F4 (green) in HepG2.215 cells under a natural state were detected by immunofluorescence images. DAPI (blue) were used to stain cell nucleus. Scale bar, 10 μm. (B) Lysates extracted from HepG2 cells expressing GFP-tagged E2F4 and Cherry-tagged Id1 were immunoprecipitated with anti-GFP or anti-Cherry, and the immunocomplexes were determined by immunoblot with respective anti-Cherry or anti-GFP antibody. (C) The western blot analysis following GST pull-down assay were performed with anti-Id1, anti-His, anti-E2F4, and anti-GST. The data showed that even though E2F4 expression in E. coli was unstable and easily degradable, Id1 also could be captured by E2F4. (D) Cytoplasmic-enriched(C) and nuclear-enriched(N) components from HepG2 cells (transfected with pCDNA3.1, pCDNA3.1+HBV1.1 and pcDNA3.1-Id1-Flag+HBV1.1, respectively) treated with a nuclear protein extraction kit were analyzed by immunoblot. Expression of GAPDH and PCNA, as markers for cytoplasm and nucleus respectively, was assessed by their specific monoclonal antibodies. The specificity of RB, p130, E2F4 and HBc bands were confirmed by their the specific antigenic peptides except Id1 by flag-antibody. (E) Southern blotting of HBV DNA was subjected to HepG2.2.15 cells after transfection early with shRNA-1/2 targeting Id1 and then infection with E2F4Ad. Southern blotting of HBV DNA was subjected to HepG2.2.15 cells after transfection early with shE2F4-1/2 targeting E2F4 and then infection with Id1Ad. The scramble control shRNA (shCont) was used as control group.

    Article Snippet: Cells were blocked by goat serum and then incubated with Id1 and E2F4 antibodies at room temperature for 1 h. Mouse anti-Id1 monoclonal antibody (sc-133104) and mouse anti-E2F4 monoclonal antibody (sc-511) was obtained from Santa Cruz Biotechnology (USA).

    Techniques: Inhibition, Immunofluorescence, Staining, Expressing, Immunoprecipitation, Western Blot, Pull Down Assay, Transfection, Protein Extraction, Bioprocessing, Southern Blot, shRNA, Infection, Control

    Mutated HBV Cp binding site of 1758-TTAAAGGTC-1766 abolished E2F4-induced promotion of HBV and Id1-induced inhibition of HBV replication. (A) ChIP assays were performed to confirm the interaction between E2F4 and HBV Cp. Lysates extracted from HepG2.2.15 were immunoprecipitated with anti-E2F4, and the immunocomplexes were subjected to PCR with specific primers. ** P < 0.01. n = 3. (B) His-tagged pET28a-E2F4 1-180 constructs were expressed in Escherichia coli BL21 (DE3) cells induced with 0.2 mM IPTG. Truncated E2F4 1-180 protein were purified using Ni-NTA affinity column followed by stain with Coomassie Brilliant Blue dye. Ladder, protein molecular-mass markers; Lane 1, cell lysate after ultrasonication; Lane 2, cell supernatant after ultrasonication; Lane 3, Ni-NTA affinity column flow through fraction; Lane 4, eluted target protein with 20 mM imidazole; Lane 5, eluted target protein with 500 mM imidazole and followed with hyperfiltration. According the grayscale analysis by Image J software, the purity of E2F4 1-180 in the total eluted protein was higher than 90%. (C) The binding activity of E2F4 1-180 protein to the HBV Cp double-stranded probes amplificated by PCR presented in a dose-dependent mode, which determined by EMSA according to the manufacturer's protocol. Specificity of the DNA-protein complex was confirmed by competition with a 10-fold molar excess of unlabeled double-stranded DNA. BSA was used as negative control. (D) pGL3-Cp△site1, pGL3-Cp△site2 and pGL3-Cp△site3 were the deletion mutants of pGL3-Cp, whose deletion sites were respective nt1638-1644, nt1758-1766 and nt1798-1805. (E) pGL3-Cp△site2 resulted in E2F4 losing the ability to activating HBV Cp, which suggested nt1758-1766 should be the potential bound sites for E2F4. * P < 0.05 and ** P < 0.01. n = 5. (F) Interaction of HBV Core promoter truncation with E2F4 1-88 protein by ITC binding analysis. (G) The three-dimensional model of homodimer E2F4-DNA complex developed through homology modelling. Cartoon and electrostatic potential surface representation of the overall structure of the complex. A saturated red color indicates Ø<-10 kiloteslas/e and a saturated blue indicates Ø>10 kiloteslas/e; T = 293 K. (H) The enlarged image of the key residues at interaction sites between E2F4 and DNA fragment. The binding site is strongly positive charged region, and the sticks represent the 32 positive residues to interaction with DNA, including Arg17, His18, Glu19, Lys20, Lys28, Arg53, Glu54, Lys55, Arg56, Arg57, Asn60, Asn63, Lys73, Lys74, Lys76, and Asn77 from Chain A and B of the E2F4 homodimer. (I) When compared with HBV1.3-WT plasmids, a evident decrease of HBV1.3-mut (containing mutated E2F4 binding site) Cp DNA fraction bound to E2F4 was proved by CHIP performed in lysates extracted from HepG2 cells transfected with HBV1.3-mut. * P < 0.05 and ** P < 0.01. n = 3. (J) The capacity of E2F4 to enhancing HBV DNA copies in HepG2 cells transducted with HBV was weakened when the binding sites occurred mutant. ** P <0.01 and ns means no significance. n = 5. (K) The HepG2 cells infected with Id1Ad were cotransfected with plasmids HBV1.3-WT or HBV1.3-mut. The negative effect of Id1 on HBV replication and transcription were also abolished by binding sites mutant of E2F4. ** P <0.01 and ns means no significance. n = 5.

    Journal: International Journal of Biological Sciences

    Article Title: Cellular Id1 inhibits hepatitis B virus transcription by interacting with the novel covalently closed circular DNA-binding protein E2F4

    doi: 10.7150/ijbs.62106

    Figure Lengend Snippet: Mutated HBV Cp binding site of 1758-TTAAAGGTC-1766 abolished E2F4-induced promotion of HBV and Id1-induced inhibition of HBV replication. (A) ChIP assays were performed to confirm the interaction between E2F4 and HBV Cp. Lysates extracted from HepG2.2.15 were immunoprecipitated with anti-E2F4, and the immunocomplexes were subjected to PCR with specific primers. ** P < 0.01. n = 3. (B) His-tagged pET28a-E2F4 1-180 constructs were expressed in Escherichia coli BL21 (DE3) cells induced with 0.2 mM IPTG. Truncated E2F4 1-180 protein were purified using Ni-NTA affinity column followed by stain with Coomassie Brilliant Blue dye. Ladder, protein molecular-mass markers; Lane 1, cell lysate after ultrasonication; Lane 2, cell supernatant after ultrasonication; Lane 3, Ni-NTA affinity column flow through fraction; Lane 4, eluted target protein with 20 mM imidazole; Lane 5, eluted target protein with 500 mM imidazole and followed with hyperfiltration. According the grayscale analysis by Image J software, the purity of E2F4 1-180 in the total eluted protein was higher than 90%. (C) The binding activity of E2F4 1-180 protein to the HBV Cp double-stranded probes amplificated by PCR presented in a dose-dependent mode, which determined by EMSA according to the manufacturer's protocol. Specificity of the DNA-protein complex was confirmed by competition with a 10-fold molar excess of unlabeled double-stranded DNA. BSA was used as negative control. (D) pGL3-Cp△site1, pGL3-Cp△site2 and pGL3-Cp△site3 were the deletion mutants of pGL3-Cp, whose deletion sites were respective nt1638-1644, nt1758-1766 and nt1798-1805. (E) pGL3-Cp△site2 resulted in E2F4 losing the ability to activating HBV Cp, which suggested nt1758-1766 should be the potential bound sites for E2F4. * P < 0.05 and ** P < 0.01. n = 5. (F) Interaction of HBV Core promoter truncation with E2F4 1-88 protein by ITC binding analysis. (G) The three-dimensional model of homodimer E2F4-DNA complex developed through homology modelling. Cartoon and electrostatic potential surface representation of the overall structure of the complex. A saturated red color indicates Ø<-10 kiloteslas/e and a saturated blue indicates Ø>10 kiloteslas/e; T = 293 K. (H) The enlarged image of the key residues at interaction sites between E2F4 and DNA fragment. The binding site is strongly positive charged region, and the sticks represent the 32 positive residues to interaction with DNA, including Arg17, His18, Glu19, Lys20, Lys28, Arg53, Glu54, Lys55, Arg56, Arg57, Asn60, Asn63, Lys73, Lys74, Lys76, and Asn77 from Chain A and B of the E2F4 homodimer. (I) When compared with HBV1.3-WT plasmids, a evident decrease of HBV1.3-mut (containing mutated E2F4 binding site) Cp DNA fraction bound to E2F4 was proved by CHIP performed in lysates extracted from HepG2 cells transfected with HBV1.3-mut. * P < 0.05 and ** P < 0.01. n = 3. (J) The capacity of E2F4 to enhancing HBV DNA copies in HepG2 cells transducted with HBV was weakened when the binding sites occurred mutant. ** P <0.01 and ns means no significance. n = 5. (K) The HepG2 cells infected with Id1Ad were cotransfected with plasmids HBV1.3-WT or HBV1.3-mut. The negative effect of Id1 on HBV replication and transcription were also abolished by binding sites mutant of E2F4. ** P <0.01 and ns means no significance. n = 5.

    Article Snippet: Cells were blocked by goat serum and then incubated with Id1 and E2F4 antibodies at room temperature for 1 h. Mouse anti-Id1 monoclonal antibody (sc-133104) and mouse anti-E2F4 monoclonal antibody (sc-511) was obtained from Santa Cruz Biotechnology (USA).

    Techniques: Binding Assay, Inhibition, Immunoprecipitation, Construct, Purification, Affinity Column, Staining, Software, Activity Assay, Negative Control, Transfection, Mutagenesis, Infection

    The comparison of Id1 and E2F4 expression in HBV-related HCC and schematic representation of the anti-HBV role of Id1. (A) The protein expression of E2F4, Id1 and HBc in TT and ANTT from 25 cases HBV-related HCC patient were tested by western blotting with β-actin used as the control protein. The right bar graph is the corresponding statistical figure. *P <0.05, **P < 0.01. n=25. (B) The conservatism of nt1758-1766 site sequence among four common HBV genotypes was shown. (C) HBV DNA were detected Id1 and E2F4 showed pan-genotypic antagonistic and synergistic effects on HBV respectively. * P < 0.05 and ** P < 0.01. n = 5. (D) Schematic representation of E2F4-induced activation of HBV transcription and the anti-HBV role of Id1. NTCP, sodium taurocholate cotransporting polypeptide; rcDNA; relaxed circular DNA, cccDNA, covalently closed circular DNA; pgRNA, pregenomic RNA; ER, endoplasmic reticulum; Golgi, Golgi apparatus.

    Journal: International Journal of Biological Sciences

    Article Title: Cellular Id1 inhibits hepatitis B virus transcription by interacting with the novel covalently closed circular DNA-binding protein E2F4

    doi: 10.7150/ijbs.62106

    Figure Lengend Snippet: The comparison of Id1 and E2F4 expression in HBV-related HCC and schematic representation of the anti-HBV role of Id1. (A) The protein expression of E2F4, Id1 and HBc in TT and ANTT from 25 cases HBV-related HCC patient were tested by western blotting with β-actin used as the control protein. The right bar graph is the corresponding statistical figure. *P <0.05, **P < 0.01. n=25. (B) The conservatism of nt1758-1766 site sequence among four common HBV genotypes was shown. (C) HBV DNA were detected Id1 and E2F4 showed pan-genotypic antagonistic and synergistic effects on HBV respectively. * P < 0.05 and ** P < 0.01. n = 5. (D) Schematic representation of E2F4-induced activation of HBV transcription and the anti-HBV role of Id1. NTCP, sodium taurocholate cotransporting polypeptide; rcDNA; relaxed circular DNA, cccDNA, covalently closed circular DNA; pgRNA, pregenomic RNA; ER, endoplasmic reticulum; Golgi, Golgi apparatus.

    Article Snippet: Cells were blocked by goat serum and then incubated with Id1 and E2F4 antibodies at room temperature for 1 h. Mouse anti-Id1 monoclonal antibody (sc-133104) and mouse anti-E2F4 monoclonal antibody (sc-511) was obtained from Santa Cruz Biotechnology (USA).

    Techniques: Comparison, Expressing, Western Blot, Control, Sequencing, Activation Assay

    Expression of E2F4 in the hepatocellular carcinoma (HCC) samples and the correlation with clinicopathological features. A. Expression of E2F4 in HCC and adjacent non-tumorous tissues was examined using quantitative real-time polymerase chain reaction (qRT-PCR). B. Expression of E2F4 in Huh7, SK-HEP-1, Hep3B, HepG2, and Bel-7402 cells. The immortalized normal liver cell line (LO2) was used as a control. C. The gene expression profiling interaction analysis (GEPIA; http://gepia.cancer-pku.cn/index.html ) database was used to evaluate the correlation between E2F4 expression and the survival rate of patients with HCC.

    Journal: Journal of Cancer

    Article Title: E2F4 Promotes the Proliferation of Hepatocellular Carcinoma Cells through Upregulation of CDCA3

    doi: 10.7150/jca.53708

    Figure Lengend Snippet: Expression of E2F4 in the hepatocellular carcinoma (HCC) samples and the correlation with clinicopathological features. A. Expression of E2F4 in HCC and adjacent non-tumorous tissues was examined using quantitative real-time polymerase chain reaction (qRT-PCR). B. Expression of E2F4 in Huh7, SK-HEP-1, Hep3B, HepG2, and Bel-7402 cells. The immortalized normal liver cell line (LO2) was used as a control. C. The gene expression profiling interaction analysis (GEPIA; http://gepia.cancer-pku.cn/index.html ) database was used to evaluate the correlation between E2F4 expression and the survival rate of patients with HCC.

    Article Snippet: The following materials and reagents were used in this study: DMEM, MEM, and trypsin (Gibco, Waltham, MA, USA); FBS (Natocor Industria Biologica, Cordoba, Argentina); Lipofectamine 3000 kit (Invitrogen, Carlsbad, CA, USA); reverse transcription kit and polyvinyl difluoride (PVDF) membranes (Roche, Basel, Switzerland); SYBR green qPCR master mix (MCE, Monmouth Junction, NJ, USA); bicinchoninic acid (BCA) protein quantitative analysis kit (ThermoFisher Scientific, Waltham, MA, USA); dual-luciferase kit (Promega, Madison, WI, USA); transwell chambers, 96-well plates, cell culture dishes (Corning, Corning, NY, USA); enhanced chemiluminescence (ECL) chromogenic solution (Bio-Rad, Hercules, CA, USA); 30% acrylamide-bis-acrylamide solution (LABTIDE, China); human anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) antibody, goat anti-rabbit secondary antibody, goat anti-mouse secondary antibody, anti-CDCA3 antibody (Proteintech, Wuhan, China); and anti-E2F4 monoclonal antibody (Santa Cruz Biotechnology, Dallas, TX, USA).

    Techniques: Expressing, Real-time Polymerase Chain Reaction, Quantitative RT-PCR, Control, Gene Expression

    Effect of E2F4 overexpression or knockdown on hepatocellular carcinoma (HCC) proliferation, migration, and invasion. E2F4 was overexpressed in Huh7 and knocked down in Hep3B cells. A. Results of the cell proliferation assay. The transfected cells were seeded and imaged using a long-term dynamic cell imaging system once every 24 h and the growth rate was calculated. B. Results of the colony formation assay. The transfected cells were cultured for one week. The cells were stained to examine the growth of colonies. C. Results of the transwell assay. The cells that passed through the membrane were stained and counted using a microscope (Magnification: 200×). D. Results of the wound-healing assay. The cell monolayer was scratched, and the migration of cells into the scratch area was monitored once every 12 h using the long-term dynamic cell imaging system.

    Journal: Journal of Cancer

    Article Title: E2F4 Promotes the Proliferation of Hepatocellular Carcinoma Cells through Upregulation of CDCA3

    doi: 10.7150/jca.53708

    Figure Lengend Snippet: Effect of E2F4 overexpression or knockdown on hepatocellular carcinoma (HCC) proliferation, migration, and invasion. E2F4 was overexpressed in Huh7 and knocked down in Hep3B cells. A. Results of the cell proliferation assay. The transfected cells were seeded and imaged using a long-term dynamic cell imaging system once every 24 h and the growth rate was calculated. B. Results of the colony formation assay. The transfected cells were cultured for one week. The cells were stained to examine the growth of colonies. C. Results of the transwell assay. The cells that passed through the membrane were stained and counted using a microscope (Magnification: 200×). D. Results of the wound-healing assay. The cell monolayer was scratched, and the migration of cells into the scratch area was monitored once every 12 h using the long-term dynamic cell imaging system.

    Article Snippet: The following materials and reagents were used in this study: DMEM, MEM, and trypsin (Gibco, Waltham, MA, USA); FBS (Natocor Industria Biologica, Cordoba, Argentina); Lipofectamine 3000 kit (Invitrogen, Carlsbad, CA, USA); reverse transcription kit and polyvinyl difluoride (PVDF) membranes (Roche, Basel, Switzerland); SYBR green qPCR master mix (MCE, Monmouth Junction, NJ, USA); bicinchoninic acid (BCA) protein quantitative analysis kit (ThermoFisher Scientific, Waltham, MA, USA); dual-luciferase kit (Promega, Madison, WI, USA); transwell chambers, 96-well plates, cell culture dishes (Corning, Corning, NY, USA); enhanced chemiluminescence (ECL) chromogenic solution (Bio-Rad, Hercules, CA, USA); 30% acrylamide-bis-acrylamide solution (LABTIDE, China); human anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) antibody, goat anti-rabbit secondary antibody, goat anti-mouse secondary antibody, anti-CDCA3 antibody (Proteintech, Wuhan, China); and anti-E2F4 monoclonal antibody (Santa Cruz Biotechnology, Dallas, TX, USA).

    Techniques: Over Expression, Knockdown, Migration, Proliferation Assay, Transfection, Imaging, Colony Assay, Cell Culture, Staining, Transwell Assay, Membrane, Microscopy, Wound Healing Assay

    E2F4 can promote cell cycle progression of hepatocellular carcinoma (HCC) cells. Huh7 cells were transfected with pCDNA3.1 or pCDNA3.1-E2F4. At 48 h post-transfection, the cells were analyzed via flow cytometry. A. Effect of E2F4 overexpression on apoptosis. B. Quantification of the number of late apoptotic cells in the pCDNA3.1-E2F4- and pCDNA3.1-transfected groups (upper right quadrant). C. Effect of E2F4 overexpression on the cell cycle. D. Quantification of the proportion of cells in the G0/1, S, and G2 phases of the cell cycle in the pCDNA3.1-E2F4- and pCDNA3.1-transfected groups.

    Journal: Journal of Cancer

    Article Title: E2F4 Promotes the Proliferation of Hepatocellular Carcinoma Cells through Upregulation of CDCA3

    doi: 10.7150/jca.53708

    Figure Lengend Snippet: E2F4 can promote cell cycle progression of hepatocellular carcinoma (HCC) cells. Huh7 cells were transfected with pCDNA3.1 or pCDNA3.1-E2F4. At 48 h post-transfection, the cells were analyzed via flow cytometry. A. Effect of E2F4 overexpression on apoptosis. B. Quantification of the number of late apoptotic cells in the pCDNA3.1-E2F4- and pCDNA3.1-transfected groups (upper right quadrant). C. Effect of E2F4 overexpression on the cell cycle. D. Quantification of the proportion of cells in the G0/1, S, and G2 phases of the cell cycle in the pCDNA3.1-E2F4- and pCDNA3.1-transfected groups.

    Article Snippet: The following materials and reagents were used in this study: DMEM, MEM, and trypsin (Gibco, Waltham, MA, USA); FBS (Natocor Industria Biologica, Cordoba, Argentina); Lipofectamine 3000 kit (Invitrogen, Carlsbad, CA, USA); reverse transcription kit and polyvinyl difluoride (PVDF) membranes (Roche, Basel, Switzerland); SYBR green qPCR master mix (MCE, Monmouth Junction, NJ, USA); bicinchoninic acid (BCA) protein quantitative analysis kit (ThermoFisher Scientific, Waltham, MA, USA); dual-luciferase kit (Promega, Madison, WI, USA); transwell chambers, 96-well plates, cell culture dishes (Corning, Corning, NY, USA); enhanced chemiluminescence (ECL) chromogenic solution (Bio-Rad, Hercules, CA, USA); 30% acrylamide-bis-acrylamide solution (LABTIDE, China); human anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) antibody, goat anti-rabbit secondary antibody, goat anti-mouse secondary antibody, anti-CDCA3 antibody (Proteintech, Wuhan, China); and anti-E2F4 monoclonal antibody (Santa Cruz Biotechnology, Dallas, TX, USA).

    Techniques: Transfection, Flow Cytometry, Over Expression

    Identification of E2F4 target genes. A. E2F4 was overexpressed in Huh7 cells and knocked down in the Hep3B cells. The expression of CDCA3 , CENPI , CDC7 , and KIF2C was examined using quantitative real-time polymerase chain reaction (qRT-PCR). B-C. The proliferation of Huh7 or Hep3B cells exhibiting overexpression or knockdown of E2F4 . D-F. Schematic representation of the full-length and truncated CDCA3 promoters. 1 to 11 represent the predicted E2F4 binding sites. Results of the dual-luciferase reporter assay. Huh7 cells were transfected with CDCA3 full-length promoter [pGL3-CDCA3 (WT)] or three truncated CDCA3 promoter (pGL3-CDCA3-Δ1, pGL3-CDCA3-Δ2, and pGL3-CDCA3-Δ3) constructs. Luciferase activity was examined at 48 h post-transfection.

    Journal: Journal of Cancer

    Article Title: E2F4 Promotes the Proliferation of Hepatocellular Carcinoma Cells through Upregulation of CDCA3

    doi: 10.7150/jca.53708

    Figure Lengend Snippet: Identification of E2F4 target genes. A. E2F4 was overexpressed in Huh7 cells and knocked down in the Hep3B cells. The expression of CDCA3 , CENPI , CDC7 , and KIF2C was examined using quantitative real-time polymerase chain reaction (qRT-PCR). B-C. The proliferation of Huh7 or Hep3B cells exhibiting overexpression or knockdown of E2F4 . D-F. Schematic representation of the full-length and truncated CDCA3 promoters. 1 to 11 represent the predicted E2F4 binding sites. Results of the dual-luciferase reporter assay. Huh7 cells were transfected with CDCA3 full-length promoter [pGL3-CDCA3 (WT)] or three truncated CDCA3 promoter (pGL3-CDCA3-Δ1, pGL3-CDCA3-Δ2, and pGL3-CDCA3-Δ3) constructs. Luciferase activity was examined at 48 h post-transfection.

    Article Snippet: The following materials and reagents were used in this study: DMEM, MEM, and trypsin (Gibco, Waltham, MA, USA); FBS (Natocor Industria Biologica, Cordoba, Argentina); Lipofectamine 3000 kit (Invitrogen, Carlsbad, CA, USA); reverse transcription kit and polyvinyl difluoride (PVDF) membranes (Roche, Basel, Switzerland); SYBR green qPCR master mix (MCE, Monmouth Junction, NJ, USA); bicinchoninic acid (BCA) protein quantitative analysis kit (ThermoFisher Scientific, Waltham, MA, USA); dual-luciferase kit (Promega, Madison, WI, USA); transwell chambers, 96-well plates, cell culture dishes (Corning, Corning, NY, USA); enhanced chemiluminescence (ECL) chromogenic solution (Bio-Rad, Hercules, CA, USA); 30% acrylamide-bis-acrylamide solution (LABTIDE, China); human anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) antibody, goat anti-rabbit secondary antibody, goat anti-mouse secondary antibody, anti-CDCA3 antibody (Proteintech, Wuhan, China); and anti-E2F4 monoclonal antibody (Santa Cruz Biotechnology, Dallas, TX, USA).

    Techniques: Expressing, Real-time Polymerase Chain Reaction, Quantitative RT-PCR, Over Expression, Knockdown, Binding Assay, Luciferase, Reporter Assay, Transfection, Construct, Activity Assay

    Relationship between  E2F4  expression and clinicopathological characteristics in 40 patients with HCC

    Journal: Journal of Cancer

    Article Title: E2F4 Promotes the Proliferation of Hepatocellular Carcinoma Cells through Upregulation of CDCA3

    doi: 10.7150/jca.53708

    Figure Lengend Snippet: Relationship between E2F4 expression and clinicopathological characteristics in 40 patients with HCC

    Article Snippet: The following materials and reagents were used in this study: DMEM, MEM, and trypsin (Gibco, Waltham, MA, USA); FBS (Natocor Industria Biologica, Cordoba, Argentina); Lipofectamine 3000 kit (Invitrogen, Carlsbad, CA, USA); reverse transcription kit and polyvinyl difluoride (PVDF) membranes (Roche, Basel, Switzerland); SYBR green qPCR master mix (MCE, Monmouth Junction, NJ, USA); bicinchoninic acid (BCA) protein quantitative analysis kit (ThermoFisher Scientific, Waltham, MA, USA); dual-luciferase kit (Promega, Madison, WI, USA); transwell chambers, 96-well plates, cell culture dishes (Corning, Corning, NY, USA); enhanced chemiluminescence (ECL) chromogenic solution (Bio-Rad, Hercules, CA, USA); 30% acrylamide-bis-acrylamide solution (LABTIDE, China); human anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) antibody, goat anti-rabbit secondary antibody, goat anti-mouse secondary antibody, anti-CDCA3 antibody (Proteintech, Wuhan, China); and anti-E2F4 monoclonal antibody (Santa Cruz Biotechnology, Dallas, TX, USA).

    Techniques: Expressing

    KEY RESOURCES TABLE

    Journal: Cell reports

    Article Title: Two Distinct E2F Transcriptional Modules Drive Cell Cycles and Differentiation

    doi: 10.1016/j.celrep.2019.05.004

    Figure Lengend Snippet: KEY RESOURCES TABLE

    Article Snippet: Mouse monoclonal anti-E2F4 , Millipore , Cat# MABE160; RRID: AB_10845939.

    Techniques: Recombinant, Protease Inhibitor, Western Blot, Imaging, Purification, RNA HS Assay, Reverse Transcription, SYBR Green Assay, Staining, Plasmid Preparation, Software

    KEY RESOURCES TABLE

    Journal: Cell reports

    Article Title: The HDAC-Associated Sin3B Protein Represses DREAM Complex Targets and Cooperates with APC/C to Promote Quiescence

    doi: 10.1016/j.celrep.2018.11.024

    Figure Lengend Snippet: KEY RESOURCES TABLE

    Article Snippet: Mouse monoclonal anti-E2F4 (clone D7) , Santa Cruz , sc-398543.

    Techniques: Transduction, Purification, Recombinant, Protease Inhibitor, DC Protein Assay, Bicinchoninic Acid Protein Assay, Transfection, Knock-Out, Plasmid Preparation, Cloning, Software, CRISPR